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BaseInfo

ncRNA ID novel_rco_miR22
Species Ricinus communis
Class miRNA
Genome position NW_002994391.1:459055-459140 [-]
Reference genome JCVI_RCG_1.1
Source SRR1027044
Length 24
Mature sequence(if miRNA) 1 - AUACCUCUGGUGGAUCGUUCUGGU - 24
Stem-loop(if miRNA) --  U     CU    --        AACUUUACUAG      C  GCU
  CA AAUGA  CAUU  GGGUAUUU           AAAUUU AG   C
  || |||||  ||||  ||||||||           |||||| ||
  GU UUGCU  GUGG  UCCAUAAG           UUUGAA UC   A
UG  C     AG    UC        ---------GA      -  AAU
Stem-loop sequence CAUAAUGACUCAUUGGGUAUUUAACUUUACUAGAAAUUUCAGGCUCAUAACUAAGUUUAGGAAUACCUCUGGUGGAUCGUUCUGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015721137.1
ncRNA:24   UGGUCUUGCUAGGUGGUCUCCAUA   1
  |||||||||||||||=||||||||
targets:1722   ACCAGAACGAUCCACUAGAGGUAU   1745

1.5 PREDICTED: Ricinus communis uncharacterized LOC107261488 (LOC107261488), mRNA uncharacterized LOC107261488(LOC107261488) coding protein psRNATarget