ncRNA ID | novel_rco_miR20 |
Species | Ricinus communis |
Class | miRNA |
Genome position | NW_002994292.1:1614913-1615002 [+] |
Reference genome | JCVI_RCG_1.1 |
Source | SRR3286332;SRR3286333;SRR3286334;SRR3286335;SRR1027044;SRR1027045 |
Length | 21 |
Mature sequence(if miRNA) | 70 - AUUUUAGGAAGGGAAUGAACA - 90 |
Stem-loop(if miRNA) |
--        U             UUUCUCUUUUUUUUUG    UC    AA   UUCAUUCC CUUCCUAAAAUGG                UCGC  UUUC  U   |||||||| |||||||||||||                ||||  ||||  U   AAGUAAGG GAAGGAUUUUACC                AGCG  AAAG  A AC        -             --------------UA    GA    CC |
Stem-loop sequence | UUCAUUCCUCUUCCUAAAAUGGUUUCUCUUUUUUUUUGUCGCUCUUUCAAUUACCGAAAAGGCGAAUCCAUUUUAGGAAGGGAAUGAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002538962.2 |
|
2.5 | PREDICTED: Ricinus communis uncharacterized LOC8286165 (LOC8286165), partial mRNA | uncharacterized LOC8286165(LOC8286165) | coding protein | psRNATarget | |||||||||
XM_015717164.1 |
|
2.5 | PREDICTED: Ricinus communis uncharacterized LOC8276825 (LOC8276825), mRNA | uncharacterized LOC8276825(LOC8276825) | coding protein | psRNATarget |