ncRNA ID | novel_rco_miR14 |
Species | Ricinus communis |
Class | miRNA |
Genome position | NW_002994321.1:660483-660555 [+] |
Reference genome | JCVI_RCG_1.1 |
Source | SRR1027045;SRR1027044 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UCUGUCGCAGGAAAGAUGGUAC - 22 |
Stem-loop(if miRNA) |
--       C     A           G    UACAA   UCUGUCG AGGAA GAUGGUACCUG UGUU     A   ||||||| ||||| ||||||||||| ||||   AGACAGC UCCUU CUACCAUGGAU ACGA     A CA       -     A           A    UAAUU |
Stem-loop sequence | UCUGUCGCAGGAAAGAUGGUACCUGGUGUUUACAAAAUUAAUAGCAAUAGGUACCAUCAUUCCUCGACAGAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002518217.2 |
|
2.5 | PREDICTED: Ricinus communis calcium-transporting ATPase 10, plasma membrane-type (LOC8258078), transcript variant X2, mRNA | calcium-transporting ATPase 10, plasma membrane-type(LOC8258078) | coding protein | psRNATarget | |||||||||
XM_015718659.1 |
|
2.5 | PREDICTED: Ricinus communis calcium-transporting ATPase 10, plasma membrane-type (LOC8258078), transcript variant X1, mRNA | calcium-transporting ATPase 10, plasma membrane-type(LOC8258078) | coding protein | psRNATarget |