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BaseInfo

ncRNA ID novel_rco_miR14
Species Ricinus communis
Class miRNA
Genome position NW_002994321.1:660483-660555 [+]
Reference genome JCVI_RCG_1.1
Source SRR1027045;SRR1027044
Length 22
Mature sequence(if miRNA) 1 - UCUGUCGCAGGAAAGAUGGUAC - 22
Stem-loop(if miRNA) --       C     A           G    UACAA
  UCUGUCG AGGAA GAUGGUACCUG UGUU     A
  ||||||| ||||| ||||||||||| ||||
  AGACAGC UCCUU CUACCAUGGAU ACGA     A
CA       -     A           A    UAAUU
Stem-loop sequence UCUGUCGCAGGAAAGAUGGUACCUGGUGUUUACAAAAUUAAUAGCAAUAGGUACCAUCAUUCCUCGACAGAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002518217.2
ncRNA:22   CAUGGUAGAAAGGACGCUGUCU   1
  ||=||||||*|||||||||||*
targets:209   GUGCCAUCUCUCCUGCGACAGU   230

2.5 PREDICTED: Ricinus communis calcium-transporting ATPase 10, plasma membrane-type (LOC8258078), transcript variant X2, mRNA calcium-transporting ATPase 10, plasma membrane-type(LOC8258078) coding protein psRNATarget
XM_015718659.1
ncRNA:22   CAUGGUAGAAAGGACGCUGUCU   1
  ||=||||||*|||||||||||*
targets:456   GUGCCAUCUCUCCUGCGACAGU   477

2.5 PREDICTED: Ricinus communis calcium-transporting ATPase 10, plasma membrane-type (LOC8258078), transcript variant X1, mRNA calcium-transporting ATPase 10, plasma membrane-type(LOC8258078) coding protein psRNATarget