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BaseInfo

ncRNA ID novel_rco_miR9
Species Ricinus communis
Class miRNA
Genome position NW_002994299.1:1512752-1512838 [+]
Reference genome JCVI_RCG_1.1
Source SRR1027045;SRR3286332;SRR3286333;SRR3286334;SRR3286335;SRR1027044
Length 21
Mature sequence(if miRNA) 67 - CGAGCCGAAUCAAUAUCACUC - 87
Stem-loop(if miRNA) --           C  A   AU    CUCUCU      CUCUC
  GUGAUAUUGGU CG CUC  CUCU      CUCUCU     U
  ||||||||||| || |||  ||||      ||||||     C
  CACUAUAACUA GC GAG  GAGA      GAGAGA     U
CU           A  C   CG    CUUCUU      UUCAA
Stem-loop sequence GUGAUAUUGGUCCGACUCAUCUCUCUCUCUCUCUCUCUCUCUCUAACUUAGAGAGUUCUUCAGAGGCGAGCCGAAUCAAUAUCACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002513735.2
ncRNA:21   CUCACUAUAACUAAGCCGAGC   1
  |=|||||||||=||||||||*
targets:799   GGGUGAUAUUGGUUCGGCUCA   819

2.5 PREDICTED: Ricinus communis nodulation-signaling pathway 2 protein (LOC8274094), mRNA nodulation-signaling pathway 2 protein(LOC8274094) coding protein psRNATarget