ncRNA ID | novel_rco_miR9 |
Species | Ricinus communis |
Class | miRNA |
Genome position | NW_002994299.1:1512752-1512838 [+] |
Reference genome | JCVI_RCG_1.1 |
Source | SRR1027045;SRR3286332;SRR3286333;SRR3286334;SRR3286335;SRR1027044 |
Length | 21 |
Mature sequence(if miRNA) | 67 - CGAGCCGAAUCAAUAUCACUC - 87 |
Stem-loop(if miRNA) |
--           C  A   AU    CUCUCU      CUCUC   GUGAUAUUGGU CG CUC  CUCU      CUCUCU     U   ||||||||||| || |||  ||||      ||||||     C   CACUAUAACUA GC GAG  GAGA      GAGAGA     U CU           A  C   CG    CUUCUU      UUCAA |
Stem-loop sequence | GUGAUAUUGGUCCGACUCAUCUCUCUCUCUCUCUCUCUCUCUCUAACUUAGAGAGUUCUUCAGAGGCGAGCCGAAUCAAUAUCACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002513735.2 |
|
2.5 | PREDICTED: Ricinus communis nodulation-signaling pathway 2 protein (LOC8274094), mRNA | nodulation-signaling pathway 2 protein(LOC8274094) | coding protein | psRNATarget |