ncRNA ID | novel_rco_miR5 |
Species | Ricinus communis |
Class | miRNA |
Genome position | NW_002995010.1:68420-68483 [+] |
Reference genome | JCVI_RCG_1.1 |
Source | SRR1027045;SRR3286332;SRR3286334;SRR1027044 |
Length | 21 |
Mature sequence(if miRNA) | 44 - UUAGAUGACCAUCAACAAACA - 64 |
Stem-loop(if miRNA) |
--         A    C    UU  UU   UG   UUUGUUGAU GUCA CUAG  AU  UGU  U   ||||||||| |||| ||||  ||  |||   AAACAACUA CAGU GAUU  UA  ACA  U AC         C    A    GG  UU   UA |
Stem-loop sequence | UUUGUUGAUAGUCACCUAGUUAUUUUGUUGUUAUACAUUAUGGUUAGAUGACCAUCAACAAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002509649.2 |
|
3.0 | PREDICTED: Ricinus communis SPX domain-containing membrane protein At4g22990 (LOC8265396), transcript variant X2, mRNA | SPX domain-containing membrane protein At4g22990(LOC8265396) | coding protein | psRNATarget | |||||||||
XM_015715311.1 |
|
3.0 | PREDICTED: Ricinus communis SPX domain-containing membrane protein At4g22990 (LOC8265396), transcript variant X1, mRNA | SPX domain-containing membrane protein At4g22990(LOC8265396) | coding protein | psRNATarget |