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BaseInfo

ncRNA ID novel_rco_miR2
Species Ricinus communis
Class miRNA
Genome position NW_002994281.1:1313307-1313374 [+]
Reference genome JCVI_RCG_1.1
Source SRR1027044
Length 21
Mature sequence(if miRNA) 1 - UGGAGAAGCAGGGCACGUGCA - 21
Stem-loop(if miRNA) --        CA               CUUUCUU
  UGGAGAAG  GGGCACGUGCAAUUC       U
  ||||||||  |||||||||||||||
  ACCUCUUC  CUCGUGCACGUUAAG       C
CA        AC               CCUCUCC
Stem-loop sequence UGGAGAAGCAGGGCACGUGCAAUUCCUUUCUUUCCCUCUCCGAAUUGCACGUGCUCCACUUCUCCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002514690.2
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  **=||||||||||||||||||
targets:1040   CCUACGUGCCCUGCUUCUCCA   1060

1.0 PREDICTED: Ricinus communis NAC domain-containing protein 100 (LOC8263409), mRNA NAC domain-containing protein 100(LOC8263409) coding protein psRNATarget
XM_015725842.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  *|||*|||=||||||||||||
targets:676   AGCAAGUGUCCUGCUUCUCCA   696

2.5 PREDICTED: Ricinus communis NAC domain-containing protein 21/22 (LOC8266284), transcript variant X2, mRNA NAC domain-containing protein 21/22(LOC8266284) coding protein psRNATarget
XM_002529908.2
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  *|||*|||=||||||||||||
targets:682   AGCAAGUGUCCUGCUUCUCCA   702

2.5 PREDICTED: Ricinus communis NAC domain-containing protein 21/22 (LOC8266284), transcript variant X1, mRNA NAC domain-containing protein 21/22(LOC8266284) coding protein psRNATarget