Search result

BaseInfo

ncRNA ID lus-miR164e
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGGAGAAGCAGGGCACGUGCA - NA
Stem-loop(if miRNA)     -       U  U  C        CA           AAAG      ACU UG  C
GGGA GAGAAGC CC UG UGGAGAAG  GGGCACGUGCA    AUCAAU   U  GC G
|||| ||||||| || || ||||||||  |||||||||||    ||||||   |  ||
CCCU CUCUUUG GG AC ACCUCUUC  CUCGUGCACGU    UGGUUA   A  CG U
    A       -  U  A        CC           ----      -CU GU  G
Stem-loop sequence GGGAGAGAAGCUCCUUGCUGGAGAAGCAGGGCACGUGCAAAAGAUCAAUACUUUGGCCGUGGCUGAUCAUUGGUUGCACGUGCUCCCCUUCUCCAACAUGGGUUUCUCAUCCC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).