ncRNA ID | lus-miR164a |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGGAGAAGCAGGGCACGUGCA - NA |
Stem-loop(if miRNA) |
U      U   --AG  G     A    CA         C  U        --------UCC ACCCCCCAGCAG  GGUGCG GUG    CA GAUGG GAAG  GGGCACGUG AU ACUAACUC           C            C  |||||| |||    || ||||| ||||  ||||||||| || ||||||||           |            A  CUACGU CAC    GU CUACC CUUC  CCCGUGUAC UG UGAUUGAG           G            C G      -   CAUA  A     C    UA         U  U        UCUUGCCAAAA AAGAACCAACUU |
Stem-loop sequence | UGGUGCGUGUGAGCAGGAUGGAGAAGCAGGGCACGUGCAUUACUAACUCUCCCACCCCCCAGCAGCACUUCAACCAAGAAGAAAACCGUUCUGAGUUAGUUGUUCAUGUGCCCAUCUUCCCCAUCAUGAUACCACUGCAUCG |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |