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BaseInfo

ncRNA ID lus-miR162b
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UCGAUAAACCUCUGCAUCCAG - NA
Stem-loop(if miRNA)    UCU     GUU U  AG      GG ACACAC  A   --    G    C    C       UC      -    A     GU  A
GUG   GAAGG   G GA  AGGGAG  A      GG GUU  UGGA GCAG GGUU AUCGAUC  UUCAUG GUUU UGUGG  UC U
|||   |||||   | ||  ||||||  |      || |||  |||| |||| |||| |||||||  |||||| |||| |||||  ||
UAC   CUUCC   C CU  UCCCUC  U      CC CAA  ACCU CGUC CCAA UAGCUAG  AAGUGC CAAA ACACU  AG C
   --U     -AU -  --      UU GAUCCC  -   CG    A    U    A       CU      A    A     --  C
Stem-loop sequence GUGUCUGAAGGGUUGUGAAGAGGGAGGGAACACACGGAGUUUGGAGGCAGCGGUUCAUCGAUCUCUUCAUGGUUUAUGUGGGUUCAUCCGAUCACAAAAACACGUGAAUCGAUCGAUAAACCUCUGCAUCCAGCAACCCCCCUAGUUUCUCCCUUCCUACCUUCUCAU

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).