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BaseInfo

ncRNA ID lus-miR162a
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UCGAUAAACCUCUGCAUCCAG - NA
Stem-loop(if miRNA) GAA     -GU   GAU  AU   A      -AC  -AC  A   --    G    C    C       UC      -    C    GGU
   GGGUU   GAU   UG  GAG GAGGGA   AC   GG GUU  UGGA GCAG GGUU AUCGAUC  UUCAUG GUUU UGUG   U
   |||||   |||   ||  ||| ||||||   ||   || |||  |||| |||| |||| |||||||  |||||| |||| ||||   C
   UUCGA   CUA   AC  CUC CUCCCU   UG   CC CAA  ACCU CGUC CCAA UAGCUAG  AAGUGC CAAA ACAC   C
--C     UGU   AGU  CC   C      CCU  AUC  C   CG    A    U    A       CU      A    A    ACU
Stem-loop sequence GAAGGGUUGUGAUGAUUGAUGAGAGAGGGAACACACGGAGUUUGGAGGCAGCGGUUCAUCGAUCUCUUCAUGGUUUCUGUGGGUUCCUCACACAAAAACACGUGAAUCGAUCGAUAAACCUCUGCAUCCAGCAACCCCCUAGUUCCUCCCUCCCUCCCCAUGAAUCUGUAGCUUC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).