ncRNA ID | lus-miR160j |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGCCUGGCUCCCUGUAUGCCA - NA |
Stem-loop(if miRNA) |
   -U   GAUCU    UUAU   A     C  GC   C         ---U   AA   CU    AUU GAA  UGG     AAGA    AGG UAUGC UG  UCC UGUAUGCCA    CGA  ACC  UCCA   A |||  |||     ||||    ||| ||||| ||  ||| |||||||||    |||  |||  ||||   C CUU  ACC     UUCU    UCC AUACG AC  AGG ACAUGCGGU    GUU  UGG  AGGU   U    UU   AAAUU    -UUC   -     A  UA   C         UGUU   GA   UU    CAU |
Stem-loop sequence | GAAUUGGGAUCUAAGAUUAUAGGAUAUGCCUGGCUCCCUGUAUGCCAUCGAAAACCCUUCCAAUUACUUACUGGAUUGGUAGUUGUUGUUGGCGUACACGGAAUCAAGCAUACCUCUUUCUUUUAAACCAUUUUC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |