Search result

BaseInfo

ncRNA ID lus-miR160i
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGCCUGGCUCCCUGUAUGCCA - NA
Stem-loop(if miRNA)     UGU  CG   U    C  GC   C         C       CCUUC     UUU
UAAA   GA  GGU AUGC UG  UCC UGUAUGCCA CGACAAC     CAGUC   U
||||   ||  ||| |||| ||  ||| ||||||||| |||||||     |||||   U
AUUU   UU  CCA UACG AC  AGG ACAUGCGGU GCUGUUG     GUUAG   G
    UCU  AU   -    A  UA   C         U       --AUA     UUU
Stem-loop sequence UAAAUGUGACGGGUUAUGCCUGGCUCCCUGUAUGCCACCGACAACCCUUCCAGUCUUUUUGUUUGAUUGAUAGUUGUCGUUGGCGUACACGGAAUCAAGCAUACCUAUUUCUUUUA

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).