ncRNA ID | lus-miR160h |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGCCUGGCUCCCUGUAUGCCA - NA |
Stem-loop(if miRNA) |
GGU        AAUU  AGA      C       C          A     A UC      ----------    A    AGAGGGUG    UG   AUAUGC UGGCUCC UGUAUGCCAC GGCAA C  CCAAUC          CCAA U    ||||||||    ||   |||||| ||||||| |||||||||| ||||| |  ||||||          ||||    UCUCCCGC    AU   UGUACG ACUGAGG ACAUGCGGUG UCGUU G  GGUUAG          GGUU U CUU        GUAU  -GA      A       U          G     - UU      ACUAUCUUUU    G |
Stem-loop sequence | GGUAGAGGGUGAAUUUGAGAAUAUGCCUGGCUCCCUGUAUGCCACAGGCAAACUCCCAAUCCCAAAUUGUUGGUUUUCUAUCAGAUUGGUUGUUGCUGGUGGCGUACAUGGAGUCAAGCAUGUAGUAUAUGCGCCCUCUUUC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |