Search result

BaseInfo

ncRNA ID lus-miR160h
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGCCUGGCUCCCUGUAUGCCA - NA
Stem-loop(if miRNA) GGU        AAUU  AGA      C       C          A     A UC      ----------    A
   AGAGGGUG    UG   AUAUGC UGGCUCC UGUAUGCCAC GGCAA C  CCAAUC          CCAA U
   ||||||||    ||   |||||| ||||||| |||||||||| ||||| |  ||||||          ||||
   UCUCCCGC    AU   UGUACG ACUGAGG ACAUGCGGUG UCGUU G  GGUUAG          GGUU U
CUU        GUAU  -GA      A       U          G     - UU      ACUAUCUUUU    G
Stem-loop sequence GGUAGAGGGUGAAUUUGAGAAUAUGCCUGGCUCCCUGUAUGCCACAGGCAAACUCCCAAUCCCAAAUUGUUGGUUUUCUAUCAGAUUGGUUGUUGCUGGUGGCGUACAUGGAGUCAAGCAUGUAGUAUAUGCGCCCUCUUUC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).