ncRNA ID | lus-miR160e |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGCCUGGCUCCCUGUAUGCCA - NA |
Stem-loop(if miRNA) |
   --U         AC  ------------UGC      C       CU             A   CU   AC   U GGA   GGAUGAUGA  UG               AUGUGC UGGCUCC  GUAUGCCAUUCGC GAG  CCA  GGA U |||   |||||||||  ||               |||||| |||||||  ||||||||||||| |||  |||  ||| CCU   CCUACUACU  AC               UAUACG ACCGAGG  UAUGCGGUAGGUG CUC  GGU  CCU C    UUC         CU  UUUUCCAUCCAUCUA      U       AG             C   -C   -A   A |
Stem-loop sequence | GGAUGGAUGAUGAACUGUGCAUGUGCCUGGCUCCCUGUAUGCCAUUCGCAGAGCUCCAACGGAUUCAUCCAUGGCCUCCGUGGAUGGCGUAUGAGGAGCCAUGCAUAUAUCUACCUACCUUUUCAUCUCAUCAUCCCUUUCC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |