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BaseInfo

ncRNA ID lus-miR160d
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGCCUGGCUCCCUGUAUGCCA - NA
Stem-loop(if miRNA)   U   UAA    G      -U   -U  UG     -   --------GU     U   U -UG      CU  -   U      C     C - U          UG -   AG        CA
GC AGC   GGUG CGGUGG  GGG  GG  GUGGU GGU          UGAGU GAG G   UAAUGG  GU GUG GCGUGC UGGCU C C GUAUGCCAUU  C AAG  CUCAUCAA  C
|| |||   |||| ||||||  |||  ||  ||||| |||          ||||| ||| |   ||||||  || ||| |||||| ||||| | | ||||||||||  | |||  ||||||||  A
CG UCG   CCAC GUCAUC  UCC  CC  UACCA CCA          ACUUA CUC C   AUUACC  CA UAU CGUACG ACCGA G G CAUGCGGUAG  G UUC  GGGUAGUU  G
  -   UAA    G      CU   UU  CU     A   ACCCCUAUUU     C   - UCA      AU  A   U      U     U A U          GU G   -G        UU
Stem-loop sequence GCUAGCUAAGGUGGCGGUGGUGGGUGGUGGUGGUGGUGUUGAGUUGAGUGUGUAAUGGCUGUGUGUGCGUGCCUGGCUCCCUGUAUGCCAUUUGCAAGAGCUCAUCAACACAGUUUUGAUGGGGCUUGGUGGAUGGCGUACUGAGUAGCCAUGCAUGCUUAUAACUACCAUUAACUCCUCCAUUCAUUUAUCCCCAACCAACCAUUCCCUUCCUUCCUACUGGCACCAAUGCUGC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).