ncRNA ID | lus-miR160c |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGCCUGGCUCCCUGGAUGCCA - NA |
Stem-loop(if miRNA) |
---------------   G  UUU   C  AA    --   U     C    -     G A     U     C  C        AG                GGA UG   GAA AA  AGUG  UGG CCUGC UGGC UCCCU G UGCCA CUAAG AG UUUUCAAA  G                ||| ||   ||| ||  ||||  ||| ||||| |||| ||||| | ||||| ||||| || ||||||||                CCU AC   CUU UU  UUAC  GCC GGACG ACCG AGGGA U ACGGU GAUUU UC AAAGGUUU  G CCUUACUUCUGAUUA   -  --U   U  GC    UU   -     U    C     G -     U     U  C        GU |
Stem-loop sequence | GGAGUGUUUGAACAAAAAGUGUGGUCCUGCCUGGCUCCCUGGAUGCCAUCUAAGCAGCUUUUCAAAAGGGUGUUUGGAAACCUUUUUAGUUGGCAUGAGGGACGCCAUGCAGGCCGUUCAUUCGUUUUUCUCAUCCAUUAGUCUUCAUUCC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |