ncRNA ID | lus-miR160b |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGCCUGGCUCCCUGUAUGCCA - NA |
Stem-loop(if miRNA) |
G    -U       ----U U      --U  -GU      C     C - U          UG -   AG        CA  GUGG  GAGUUAG     G GUAAUG   GU   GCGUGC UGGCU C C GUAUGCCAUU  C AAG  CUCAUCAA  C  ||||  |||||||     | ||||||   ||   |||||| ||||| | | ||||||||||  | |||  ||||||||  A  UACC  UUCAAUC     C CGUUAC   CA   CGUACG ACCGA G G CAUGCGGUAG  G UUC  GGGUAGUU  G U    UC       UAAAC U      UAU  AUC      U     U A U          GU G   -G        UU |
Stem-loop sequence | GGUGGUGAGUUAGUGUGUAAUGUGUGUGCGUGCCUGGCUCCCUGUAUGCCAUUUGCAAGAGCUCAUCAACACAGUUUUGAUGGGGCUUGGUGGAUGGCGUACUGAGUAGCCAUGCAUGCCUAACUAUCAUUGCUCCAAAUCUAACUUCUCCAUU |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |