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BaseInfo

ncRNA ID lus-miR159c
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UUUGGAUUGAAGGGAGCUCUU - NA
Stem-loop(if miRNA)        AAAAAGAG             G        CA     ------U UG       UGA      A   G     C    G -----UU             -CG   C
GAGAGAU        GGAGAGCUCCUUU GGUCCAAA  GAGGG       G  GAUAGGG   AACGGA GCU CUGAG UAUG A       CCACAGCCACCCC   UAU U
|||||||        ||||||||||||| ||||||||  |||||       |  |||||||   |||||| ||| ||||| |||| |       |||||||||||||   ||| U
UUCUUUA        CUUCUCGAGGGAA UUAGGUUU  CUCCC       C  UUGUCCC   UUGCCU CGA GACUC AUAC U       GGUGUUGGUGGGG   AUA A
       --------             G        -C     UUCUUUU UU       ---      C   G     U    G UUUGCUC             UUA   A
Stem-loop sequence GAGAGAUAAAAAGAGGGAGAGCUCCUUUGGGUCCAAACAGAGGGUGUGGAUAGGGUGAAACGGAAGCUGCUGAGCUAUGGAUUCCACAGCCACCCCCGUAUCUUAAAUAAUUGGGGUGGUUGUGGCUCGUUUUGCAUAUCUCAGGAGCCUCCGUUCCCUGUUUUCUUUUCUUCCCUCCUUUGGAUUGAAGGGAGCUCUUCAUUUCUU

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).