ncRNA ID | lus-miR159c |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UUUGGAUUGAAGGGAGCUCUU - NA |
Stem-loop(if miRNA) |
       AAAAAGAG             G        CA     ------U UG       UGA      A   G     C    G -----UU             -CG   C GAGAGAU        GGAGAGCUCCUUU GGUCCAAA  GAGGG       G  GAUAGGG   AACGGA GCU CUGAG UAUG A       CCACAGCCACCCC   UAU U |||||||        ||||||||||||| ||||||||  |||||       |  |||||||   |||||| ||| ||||| |||| |       |||||||||||||   ||| U UUCUUUA        CUUCUCGAGGGAA UUAGGUUU  CUCCC       C  UUGUCCC   UUGCCU CGA GACUC AUAC U       GGUGUUGGUGGGG   AUA A        --------             G        -C     UUCUUUU UU       ---      C   G     U    G UUUGCUC             UUA   A |
Stem-loop sequence | GAGAGAUAAAAAGAGGGAGAGCUCCUUUGGGUCCAAACAGAGGGUGUGGAUAGGGUGAAACGGAAGCUGCUGAGCUAUGGAUUCCACAGCCACCCCCGUAUCUUAAAUAAUUGGGGUGGUUGUGGCUCGUUUUGCAUAUCUCAGGAGCCUCCGUUCCCUGUUUUCUUUUCUUCCCUCCUUUGGAUUGAAGGGAGCUCUUCAUUUCUU |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |