ncRNA ID | lus-miR159a |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - AUUGGAGUGAAGGGAGCUCGA - NA |
Stem-loop(if miRNA) |
--                 UUU UG      GGUGA   -   U      G  AG   GU     AUU    C     AUUA -  GAG   GAGCUCUCUUCACUCCA   C  AAAGGA     UAG GUA GCCAUG CU  CAG  UCAUG   ACCC UAGCC    G UC   U   |||||||||||||||||   |  ||||||     ||| ||| |||||| ||  |||  |||||   |||| |||||    | ||   U   CUCGAGGGAAGUGAGGU   G  UUUUCU     GUC CAU CGGUAC GA  GUC  AGUAC   UGGG AUCGG    C AG   U AG                 UAC GU      ----A   U   -      G  GG   UG     GCU    C     -AUG G  AAG |
Stem-loop sequence | GAGCUCUCUUCACUCCAUUUCUGAAAGGAGGUGAUAGGUAUGCCAUGGCUAGCAGGUUCAUGAUUACCCCUAGCCAUUAGUCGAGUUUGAAGAGCGUAGGCUACGGGUUCGCAUGAGUCUGGGAGGCAUGGCUACUCUGAUCUUUUUGGCAUUGGAGUGAAGGGAGCUCGA |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |