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BaseInfo

ncRNA ID lus-miR159a
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - AUUGGAGUGAAGGGAGCUCGA - NA
Stem-loop(if miRNA) --                 UUU UG      GGUGA   -   U      G  AG   GU     AUU    C     AUUA -  GAG
  GAGCUCUCUUCACUCCA   C  AAAGGA     UAG GUA GCCAUG CU  CAG  UCAUG   ACCC UAGCC    G UC   U
  |||||||||||||||||   |  ||||||     ||| ||| |||||| ||  |||  |||||   |||| |||||    | ||   U
  CUCGAGGGAAGUGAGGU   G  UUUUCU     GUC CAU CGGUAC GA  GUC  AGUAC   UGGG AUCGG    C AG   U
AG                 UAC GU      ----A   U   -      G  GG   UG     GCU    C     -AUG G  AAG
Stem-loop sequence GAGCUCUCUUCACUCCAUUUCUGAAAGGAGGUGAUAGGUAUGCCAUGGCUAGCAGGUUCAUGAUUACCCCUAGCCAUUAGUCGAGUUUGAAGAGCGUAGGCUACGGGUUCGCAUGAGUCUGGGAGGCAUGGCUACUCUGAUCUUUUUGGCAUUGGAGUGAAGGGAGCUCGA

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).