ncRNA ID | ath-miR847 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr1:2165517-2165746 [+] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 159 - UCACUCCUCUUCUUCUUGAUG - 179 |
Stem-loop(if miRNA) |
CA   -     UAUUCAAAGUAUCUUAAGUUAAGAAGAGAAUAAGAUUCUUACAUCUUGAUGAAGAGGAAUGGGAAGCCGAAAUCUAAACUGAAACAGAGGCGUCACCCAAUUA   UUU UCUUG                                                                                                       U   ||| |||||                                                                                                       C   UAG UUGUC                                                                                                       A UA   A     UAAAAAGUGAGGUAGAUUACACAGCUUAUUGUUUAAGAAUGUAGUUCUUCUUCUCCUCACUUUCCGGCUCUAUGUCUAGCUUUGUAUCUAUAGUGAAUGGUUA |
Stem-loop sequence | CAUUUUCUUGUAUUCAAAGUAUCUUAAGUUAAGAAGAGAAUAAGAUUCUUACAUCUUGAUGAAGAGGAAUGGGAAGCCGAAAUCUAAACUGAAACAGAGGCGUCACCCAAUUAUCAAUUGGUAAGUGAUAUCUAUGUUUCGAUCUGUAUCUCGGCCUUUCACUCCUCUUCUUCUUGAUGUAAGAAUUUGUUAUUCGACACAUUAGAUGGAGUGAAAAAUCUGUUAGAUAU |
1 | PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"; Rajagopalan R, Vaucheret H, Trejo J, Bartel DP; Genes Dev. 20:3407-3425(2006). |