ncRNA ID | lus-miR156a |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | NA - UGACAGAAGAGAGUGAGCAC - NA |
Stem-loop(if miRNA) |
      -      -----U               U  G   GG    ---   C            -        A  AA AG    UU    GG AGAGAG AGAUAA      GGGAGGAGGAGGAGG GA GAG  UGAU   AGA UGACAGAAGAGA GUGAGCAC CA  C  GCAA  GUAU  A |||||| ||||||      ||||||||||||||| || |||  ||||   ||| |||||||||||| |||||||| ||  |  ||||  ||||  U UCUCUC UCUAUU      UCCUCCUCCUCCUCC CU UUC  GUUA   UCU ACUGUCUUCUCU CACUCGUG GU  G  CGUU  CAUG  G       C      CUAGUU               U  A   UA    AAC   -            U        C  GG -G    UC    AG |
Stem-loop sequence | AGAGAGAGAUAAUGGGAGGAGGAGGAGGUGAGGAGGGUGAUAGACUGACAGAAGAGAGUGAGCACACAAACAGGCAAUUGUAUGGAUGGAGUACCUUUGCGGGGUGCGUGCUCACUUCUCUUCUGUCAUCUCAAAUUGAUCUUAUCUCCUCCUCCUCCUCCUUUGAUCUUAUCUCCUCUCU |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |