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BaseInfo

ncRNA ID lus-miR156a
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 20
Mature sequence(if miRNA) NA - UGACAGAAGAGAGUGAGCAC - NA
Stem-loop(if miRNA)       -      -----U               U  G   GG    ---   C            -        A  AA AG    UU    GG
AGAGAG AGAUAA      GGGAGGAGGAGGAGG GA GAG  UGAU   AGA UGACAGAAGAGA GUGAGCAC CA  C  GCAA  GUAU  A
|||||| ||||||      ||||||||||||||| || |||  ||||   ||| |||||||||||| |||||||| ||  |  ||||  ||||  U
UCUCUC UCUAUU      UCCUCCUCCUCCUCC CU UUC  GUUA   UCU ACUGUCUUCUCU CACUCGUG GU  G  CGUU  CAUG  G
      C      CUAGUU               U  A   UA    AAC   -            U        C  GG -G    UC    AG
Stem-loop sequence AGAGAGAGAUAAUGGGAGGAGGAGGAGGUGAGGAGGGUGAUAGACUGACAGAAGAGAGUGAGCACACAAACAGGCAAUUGUAUGGAUGGAGUACCUUUGCGGGGUGCGUGCUCACUUCUCUUCUGUCAUCUCAAAUUGAUCUUAUCUCCUCCUCCUCCUCCUUUGAUCUUAUCUCCUCUCU

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).