Search result

BaseInfo

ncRNA ID ath-miR2938
Species Arabidopsis thaliana
Class miRNA
Genome position chr5:22251822-22251921 [-]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 6 - GAUCUUUUGAGAGGGUUCCAG - 26
Stem-loop(if miRNA)           C         UU     UCUAAU  G        CU  UCCA
AAAAACUGGA CCCUCUUAA  AGAUC      UU UUUUCUUU  UC    A
|||||||||| |||||||||  |||||      || ||||||||  ||
UUUUUGACCU GGGAGAGUU  UCUAG      AA AAAAGAAA  AG    A
          U         -U     ----UU  G        -C  UUUA
Stem-loop sequence AAAAACUGGACCCCUCUUAAUUAGAUCUCUAAUUUGUUUUCUUUCUUCUCCAAAAUUUGACAAAGAAAAGAAUUGAUCUUUUGAGAGGGUUCCAGUUUUU

Reference

1 PMID:20042113
"MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana";
Grant-Downton R, Le Trionnaire G, Schmid R, Rodriguez-Enriquez J, Hafidh S, Mehdi S, Twell D, Dickinson H;
BMC Genomics. 10:643(2009).