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BaseInfo

ncRNA ID	gra-miR398
Species	Gossypium raimondii
Class	miRNA
Genome position	NA
Reference genome	NA
Source	miRBase
Length	21
Mature sequence(if miRNA)	NA - UGUGUUCUCAGGUCACCCCUU - NA
Stem-loop(if miRNA)	-----------------  C      -GUU               CC    A          UC  CCCU                  GC AAGAUG    UACCCCAGAGGGGUG  ACCU AGAACACAGG  AU    U                  || ||||||    |||||||||||||||  |||| ||||||||||  ||    A                  CG UUCUAU    AUGGGGUUUCCCCAC  UGGA UCUUGUGUUC  UA    A CGUUUGUUUUCCCUUAC  C      AUAC               --    C          GA  AACC
Stem-loop sequence	GCCAAGAUGGUUUACCCCAGAGGGGUGCCACCUAAGAACACAGGUCAUCCCUUAACCAAAUAGCUUGUGUUCUCAGGUCACCCCUUUGGGGUACAUAUAUCUUCGCCAUUCCCUUUUGUUUGC

Reference

1

PMID:19889219 "Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.)"; Pang M, Woodward AW, Agarwal V, Guan X, Ha M, Ramachandran V, Chen X, Triplett BA, Stelly DM, Chen ZJ; Genome Biol. 10:R122(2009).