| ncRNA ID | gra-miR8677 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | KB204168.1:8447-8558 [+] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 11 - AAUGAAUCUAGGUUCUCUCUU - 31 |
| Stem-loop(if miRNA) |
- - C -- CAUUUUUU C UUUU CUGGG AAUGAAUCUAGGUUCUCUCUU GCUC CAUAUUUUC U |||| ||||| ||||||||||||||||||||| |||| ||||||||| U AAAA GACCC UUACUUAGAUCCAAGAGGGAA CGAG GUAUAAAAG G G C A UG -AACUUCU U |
| Stem-loop sequence | UUUUCUGGGCAAUGAAUCUAGGUUCUCUCUUGCUCCAUUUUUUCAUAUUUUCCUUGUGAAAAUAUGUCUUCAAGAGCGUAAGGGAGAACCUAGAUUCAUUACCCAGCAAAAG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012625213.1 |
|
1.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105795531 (LOC105795531), transcript variant X4, mRNA | uncharacterized LOC105795531(LOC105795531) | coding protein | psRNATarget | |||||||||
| XM_012625212.1 |
|
1.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105795531 (LOC105795531), transcript variant X3, mRNA | uncharacterized LOC105795531(LOC105795531) | coding protein | psRNATarget | |||||||||
| XM_012625211.1 |
|
1.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105795531 (LOC105795531), transcript variant X2, mRNA | uncharacterized LOC105795531(LOC105795531) | coding protein | psRNATarget | |||||||||
| XM_012625210.1 |
|
1.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105795531 (LOC105795531), transcript variant X1, mRNA | uncharacterized LOC105795531(LOC105795531) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |