ncRNA ID | gra-miR8636 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr9:70463171-70463384 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - CGGACCCUCUAACAGUGGAGG - 31 |
Stem-loop(if miRNA) |
-   U  C  C         U               A    AAGU    GGCCAA     CUAAAAACAUUUCCUUGGUGGAUUAGGCGCUGCAGUCAAACUCUGUA  GGC GU GA CGGACCCUC AACAGUGGAGGUGUU UGCU    GGUG      AAAUG                                               A  ||| || || ||||||||| ||||||||||||||| ||||    ||||      |||||                                               A  UCG CG CU GCCUGGGAG UUGUUACCUCCAUAA ACGG    CCAC      GAGCC                                               C C   U  A  A         U               C    --GC    AGAUAC     AAAAUCUGGGCACAAAACAGAGGGAUGAGGUUCCUUUUGGGUUUCCC |
Stem-loop sequence | GGCUGUCGACCGGACCCUCUAACAGUGGAGGUGUUAUGCUAAGUGGUGGGCCAAAAAUGCUAAAAACAUUUCCUUGGUGGAUUAGGCGCUGCAGUCAAACUCUGUAAACCCCUUUGGGUUUUCCUUGGAGUAGGGAGACAAAACACGGGUCUAAAACCGAGCAUAGACACCCGGGCACAAUACCUCCAUUGUUUGAGGGUCCGAUCAGCUGCUC |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |