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BaseInfo

ncRNA ID gra-miR7486j
Species Gossypium raimondii
Class miRNA
Genome position chr9:68902323-68902469 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 114 - CAUCAGCGCGAUGUCAGGGGACGU - 137
Stem-loop(if miRNA) -           A             A             CAAAUCGC        C  CGCGCUUUGCUUAUGUG
 AUCGCGUUCAC UCAGCGCGAUGUC GGGGACGUGUCAG        GUCCACAU AG                 G
 ||||||||||| ||||||||||||| |||||||||||||        |||||||| ||                 A
 UAGCGCAGGUG AGUCGCGCUACAG CCCCUGCACAGUC        UUUGGCGU GG                 C
U           C             A             -------U        A  AGCAUCCACGCUAAACA
Stem-loop sequence AUCGCGUUCACAUCAGCGCGAUGUCAGGGGACGUGUCAGCAAAUCGCGUCCACAUCAGCGCGCUUUGCUUAUGUGGACACAAAUCGCACCUACGAGGAUGCGGUUUUCUGACACGUCCCCAGACAUCGCGCUGACGUGGACGCGAUU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).