ncRNA ID | gra-miR7486j |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr9:68902323-68902469 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 114 - CAUCAGCGCGAUGUCAGGGGACGU - 137 |
Stem-loop(if miRNA) |
-           A             A             CAAAUCGC        C  CGCGCUUUGCUUAUGUG  AUCGCGUUCAC UCAGCGCGAUGUC GGGGACGUGUCAG        GUCCACAU AG                 G  ||||||||||| ||||||||||||| |||||||||||||        |||||||| ||                 A  UAGCGCAGGUG AGUCGCGCUACAG CCCCUGCACAGUC        UUUGGCGU GG                 C U           C             A             -------U        A  AGCAUCCACGCUAAACA |
Stem-loop sequence | AUCGCGUUCACAUCAGCGCGAUGUCAGGGGACGUGUCAGCAAAUCGCGUCCACAUCAGCGCGCUUUGCUUAUGUGGACACAAAUCGCACCUACGAGGAUGCGGUUUUCUGACACGUCCCCAGACAUCGCGCUGACGUGGACGCGAUU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |