| ncRNA ID | ath-miR8181 |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr5:21641177-21641308 [-] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 20 |
| Mature sequence(if miRNA) | 113 - UGGGGGUGGGGGGGUGACAG - 132 |
| Stem-loop(if miRNA) |
U UG G G U --A -A CG CAUGA GCAC UU G GGGGG G G GG GACAG GAC UUCUUCAUU UAUGCU UGACGUCA GGG CAU G ||||| | | || ||||| ||| ||||||||| |||||| |||||||| ||| ||| U CUCCU U C UC UUGUC UUG AGGAAGUAG GUACGA AUUGUAGU UCU GUG U A GG G G - GUU AA AU ----- ---- GG U |
| Stem-loop sequence | UGGGGGUGGGGGGGUGACAGAGACAUUCUUCAUUCGUAUGCUCAUGAUGACGUCAGCACGGGUUCAUGGUUUGUGGGUCUUGAUGUUAAGCAUGUAGAUGAAGGAAAGUUUUGCUGUUCUGCGUGGUCCUCA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BX831911.1 |
|
3.0 | Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZB07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) | NA | coding protein | psRNATarget | |||||||||
| BX833924.1 |
|
3.0 | Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) | NA | coding protein | psRNATarget |
| 1 | PMID:24119003
"Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots"; Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutierrez RA; BMC Genomics. 14:701(2013). |