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BaseInfo

ncRNA ID gra-miR8714
Species Gossypium raimondii
Class miRNA
Genome position chr9:66775782-66776042 [-]
Reference genome Graimondii2_0
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - AUGGACGAAAUGAAAGUAGAG - 31
Stem-loop(if miRNA) C                       CAA        G      CC   A       C         -     -AC   UU  UGUGUUUGCCCCUUGACUUGUAAUGAAAUUUUUAGUUUGGCCUCUGUAUGA
 ACUUUGUCCUCUCUACUUUCAUU   UCCAUCAC UUAGCC  UUG CCAUUUC GUUAAAAAA AUUCC   CUG  CA                                                   U
 |||||||||||||||||||||||   |||||||| ||||||  ||| ||||||| ||||||||| |||||   |||  ||
 UGAAACGGGAGAGAUGAAAGUAA   AGGUAGUG AAUCGG  AAC GGUAAAG CAAUUUUUU UAGGG   ACC  GG                                                   A
-                       AGC        A      AU   C       A         C     CAC   --  UAAAUUCGGUUAGUUUAGACUUGUGUACUCCCCGGUUUCACUUUUGAAGUG
Stem-loop sequence CACUUUGUCCUCUCUACUUUCAUUCAAUCCAUCACGUUAGCCCCUUGACCAUUUCCGUUAAAAAAAUUCCACCUGUUCAUGUGUUUGCCCCUUGACUUGUAAUGAAAUUUUUAGUUUGGCCUCUGUAUGAUAGUGAAGUUUUCACUUUGGCCCCUCAUGUGUUCAGAUUUGAUUGGCUUAAAUGGCCACACGGGAUCUUUUUUAACAGAAAUGGCCAAUAGGCUAAAGUGAUGGACGAAAUGAAAGUAGAGAGGGCAAAGU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).