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BaseInfo

ncRNA ID	gra-miR8652
Species	Gossypium raimondii
Class	miRNA
Genome position	chr9:66471842-66472038 [-]
Reference genome	Graimondii2_0
Source	miRBase
Length	23
Mature sequence(if miRNA)	165 - AUUAUGUGUAUGAAACUUUAGUU - 187
Stem-loop(if miRNA)	-       AC            G   C   A         --UAAA       --   UAUUUAUUUAUUUUCAUAUUGAAAUAAUAUAAUUGUUUAUUU  AUUUGGU  AAUUAUGUGUAU AAA UUU GUUGUGGUU      GAAGUAA  AUA                                          G  |||||||  |||||||||||| ||| ||| |||||||||      |||||||  |||  UAAAUCA  UUAAUACAUAUA UUU AAA CAACAUUAA      AUGUUUG  GAU                                          C C       CA            A   A   C         CUAAAA       GU   GUUUUUAAUAGGUACAUUGUUAUAAAAUGCAAAUAUAUAAUG
Stem-loop sequence	AUUUGGUACAAUUAUGUGUAUGAAACUUUAGUUGUGGUUUAAAGAAGUAAAUAUAUUUAUUUAUUUUCAUAUUGAAAUAAUAUAAUUGUUUAUUUGCGUAAUAUAUAAACGUAAAAUAUUGUUACAUGGAUAAUUUUUGUAGUGGUUUGUAAAAAUCAAUUACAACCAAAAUUUAAUAUACAUAAUUACACUAAAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012629060.1	ncRNA:23   UUGAUUUCAAAGUAUGUGUAUUA   1   =||*||||||*|||||||||||| targets:2483   GACGAAAGUUGCAUACACAUAAU   2505 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii cullin-1-like (LOC105798849), mRNA	cullin-1-like(LOC105798849)	coding protein	psRNATarget

Reference

1	PMID:24044642 "Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013).