| ncRNA ID | gra-miR8687 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr9:23427974-23428238 [-] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 232 - AGAGACAAAAGAAACACGUUCUAC - 255 |
| Stem-loop(if miRNA) |
- - CAA A A CG U C GU --UU UU ----U C GUU AG UGUUUUUA AGAGAGA AAGAAAC CGUUCUACAAGG ACGUUUUCAU AUGUGGUA UGAAAACAUGUC UGUAAGAC GUUUUCACUUUGUUAAAA AUU CAU CUGU AUAA UU U |||||||| ||||||| ||||||| |||||||||||| |||||||||| |||||||| |||||||||||| |||||||| |||||||||||||||||| ||| ||| |||| |||| || AUAAAAAU UCUCUCU UUUUUUG GCAGGAUGUUCC UGCAAAAGUG UAUACCGU ACUUUUGUACGG ACAUUCUG UAAAAGUGAAACAAUUUU UAA GUA GACA UAUU AG A A C UUG C G AU C A AG UUUU GG UAUCU - AGU CU |
| Stem-loop sequence | UGUUUUUAAGAGAGACAAAAGAAACACGUUCUACAAGGAACGUUUUCAUCGAUGUGGUAUUGAAAACAUGUCCUGUAAGACGUGUUUUCACUUUGUUAAAAUUAUUUUCAUUCUGUCAUAAGUUUUAGUAUCGAUGAUUAUACAGUCUAUAUGGGAAUUUUUUUUUAACAAAGUGAAAAUGAGUCUUACAAGGCAUGUUUUCACUGCCAUAUUAGUGAAAACGUGCCUUGUAGGACGCGUUUUUUGUUUCUCUCUCUAAAAAUAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012582354.1 |
|
2.5 | PREDICTED: Gossypium raimondii transcription factor MYC2-like (LOC105763947), mRNA | transcription factor MYC2-like(LOC105763947) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |