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BaseInfo

ncRNA ID gra-miR8754
Species Gossypium raimondii
Class miRNA
Genome position chr9:23129834-23130029 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - UGCCGCCUGACACACUGACGACAC - 34
Stem-loop(if miRNA) -   UC  ------C        C  A   AC           CCCAUUUUUCUCCCCAAUCAUUC  UCAUCAUUACCAGUAUGUAUUUUUUAAAGAUACCUGAAAAA
 GCC  GU       GGUGCCGC UG CAC  UGACGACACUA                       UG                                         U
 |||  ||       |||||||| || |||  |||||||||||                       ||
 CGG  CA       CCACGGCG AC GUG  GCUGUUGUGGU                       UU                                         A
G   UC  UUUAUCU        A  C   CC           -----------------AAUCUU  AUAUAUAAAAAGAAGAAAAAAAAAUUUUUAACCAUAUGGGC
Stem-loop sequence GCCUCGUCGGUGCCGCCUGACACACUGACGACACUACCCAUUUUUCUCCCCAAUCAUUCUGUCAUCAUUACCAGUAUGUAUUUUUUAAAGAUACCUGAAAAAUACGGGUAUACCAAUUUUUAAAAAAAAAGAAGAAAAAUAUAUAUUUUCUAAUGGUGUUGUCGCCGUGCCAAGCGGCACCUCUAUUUACCUGGCG

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).