ncRNA ID | gra-miR8754 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr9:23129834-23130029 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - UGCCGCCUGACACACUGACGACAC - 34 |
Stem-loop(if miRNA) |
-   UC  ------C        C  A   AC           CCCAUUUUUCUCCCCAAUCAUUC  UCAUCAUUACCAGUAUGUAUUUUUUAAAGAUACCUGAAAAA  GCC  GU       GGUGCCGC UG CAC  UGACGACACUA                       UG                                         U  |||  ||       |||||||| || |||  |||||||||||                       ||  CGG  CA       CCACGGCG AC GUG  GCUGUUGUGGU                       UU                                         A G   UC  UUUAUCU        A  C   CC           -----------------AAUCUU  AUAUAUAAAAAGAAGAAAAAAAAAUUUUUAACCAUAUGGGC |
Stem-loop sequence | GCCUCGUCGGUGCCGCCUGACACACUGACGACACUACCCAUUUUUCUCCCCAAUCAUUCUGUCAUCAUUACCAGUAUGUAUUUUUUAAAGAUACCUGAAAAAUACGGGUAUACCAAUUUUUAAAAAAAAAGAAGAAAAAUAUAUAUUUUCUAAUGGUGUUGUCGCCGUGCCAAGCGGCACCUCUAUUUACCUGGCG |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |