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BaseInfo

ncRNA ID gra-miR399
Species Gossypium raimondii
Class miRNA
Genome position chr8:55810583-55810678 [+]
Reference genome Graimondii2_0
Source miRBase
Length 22
Mature sequence(if miRNA) 11 - GGGCACCUCUCACUUAGGCAGG - 32
Stem-loop(if miRNA) AC     U       C     A   A       A    -U   UAUUA
  CAGUC UAGGGCA CUCUC CUU GGCAGGU AUGG  GCA     U
  ||||| ||||||| ||||| ||| ||||||| ||||  |||
  GUCAG GUCCCGU GAGAG GAA CCGUUCA UACC  UGU     G
UC     U       U     -   A       G    CU   UUACG
Stem-loop sequence ACCAGUCUUAGGGCACCUCUCACUUAGGCAGGUAAUGGUGCAUAUUAUGGCAUUUGUUCCCAUGACUUGCCAAAGGAGAGUUGCCCUGUGACUGCU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).