ncRNA ID | gra-miR399 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr8:55810583-55810678 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 11 - GGGCACCUCUCACUUAGGCAGG - 32 |
Stem-loop(if miRNA) |
AC     U       C     A   A       A    -U   UAUUA   CAGUC UAGGGCA CUCUC CUU GGCAGGU AUGG  GCA     U   ||||| ||||||| ||||| ||| ||||||| ||||  |||   GUCAG GUCCCGU GAGAG GAA CCGUUCA UACC  UGU     G UC     U       U     -   A       G    CU   UUACG |
Stem-loop sequence | ACCAGUCUUAGGGCACCUCUCACUUAGGCAGGUAAUGGUGCAUAUUAUGGCAUUUGUUCCCAUGACUUGCCAAAGGAGAGUUGCCCUGUGACUGCU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |