| ncRNA ID | gra-miR8743b |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr8:54761476-54761713 [+] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 11 - UUUGGAAAGUUAUAAAAUGGUCAU - 34 |
| Stem-loop(if miRNA) |
GC A U UC U - - ---- UCGGUCAUCAGUUAGUUAAUGUAAAAAUGGAAGCACCCAAAAAUUCAAGAUAGUUGA C CUCAACU UGGAAAGUUAUAAAAUGGUCA UAAUUA UUUAA UU UUGU CUUUU G | ||||||| ||||||||||||||||||||| |||||| ||||| || |||| ||||| G GAGUUGA ACUUUUCAAUGUUUUACCAGU GUUGAU AUUUA AG AAAA AAGUG U CA C U GA C A A AAAU GGUUGAUACUUUUUAUGUUUUACUAGUGAGUUGUUAAAUUAAAACAGAAAAAACCAG |
| Stem-loop sequence | GCCACUCAACUUUGGAAAGUUAUAAAAUGGUCAUCUAAUUAUUUUAAUUUUGUCUUUUUCGGUCAUCAGUUAGUUAAUGUAAAAAUGGAAGCACCCAAAAAUUCAAGAUAGUUGAGUGACCAAAAAAGACAAAAUUAAAUUGUUGAGUGAUCAUUUUGUAUUUUUCAUAGUUGGGUGAAUAAAAAAAAGAAAUUUACUAGUUGAGUGACCAUUUUGUAACUUUUCAUAGUUGAGCGAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012588958.1 |
|
1.5 | PREDICTED: Gossypium raimondii polygalacturonase At1g48100 (LOC105768785), mRNA | polygalacturonase At1g48100(LOC105768785) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |