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BaseInfo

ncRNA ID gra-miR8662
Species Gossypium raimondii
Class miRNA
Genome position chr8:50168684-50168810 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - GGCGUACUUUCAGAGAACAUUUUG - 34
Stem-loop(if miRNA) AU                          C          A      C   C  CCUAUAC   AU
  UGAGGUGGUAGAAUGUUCUCUGAAAG ACGCCUUGUA GACGCA UUU AG       GAC  C
  |||||||||||||||||||||||||| |||||||||| |||||| ||| ||       |||
  AUUCCACCGUUUUACAAGAGACUUUC UGCGGGACAU CUGCGU AAA UC       CUG  C
CU                          A          C      A   U  -----AA   AA
Stem-loop sequence AUUGAGGUGGUAGAAUGUUCUCUGAAAGCACGCCUUGUAAGACGCACUUUCAGCCUAUACGACAUCCAAGUCAACUUAAAAUGCGUCCUACAGGGCGUACUUUCAGAGAACAUUUUGCCACCUUAUC

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).