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BaseInfo

ncRNA ID gra-miR8762e
Species Gossypium raimondii
Class miRNA
Genome position chr8:43422860-43423100 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 208 - UUUUUAACUUUACUGACAUGGCAU - 231
Stem-loop(if miRNA) GUUACUGU    U        A    CA          --  GGAUGAUCCAUCAGCAUUUAAUUAAUUUUUAAAUUUUAAAAACUUUAAAAAAAUAUUUUUAAAAAUUAAAAUCAUUAA
        UUUU UUAACUUU CUGA  UGGCAUACAC  GU                                                                              A
        |||| |||||||| ||||  ||||||||||  ||                                                                              A
        GAAA AAUUGAAA GACU  ACCGUAUGUG  AC                                                                              U
UUUUAAUU    C        C    AC          CA  UAACGGUGCACCUACUCAUGUACAGUUGUAAAUUAACUUAAAAAUUUUAAAUUUUCUAUAUUUUUUAUAAAAAUUUAU
Stem-loop sequence GUUACUGUUUUUUUUAACUUUACUGACAUGGCAUACACGUGGAUGAUCCAUCAGCAUUUAAUUAAUUUUUAAAUUUUAAAAACUUUAAAAAAAUAUUUUUAAAAAUUAAAAUCAUUAAAAUUAUUUAAAAAUAUUUUUUAUAUCUUUUAAAUUUUAAAAAUUCAAUUAAAUGUUGACAUGUACUCAUCCACGUGGCAAUCAACGUGUAUGCCACAUCAGCAAAGUUAACAAAGUUAAUUUU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).