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BaseInfo

ncRNA ID gra-miR8663b
Species Gossypium raimondii
Class miRNA
Genome position chr8:33878980-33879265 [-]
Reference genome Graimondii2_0
Source miRBase
Length 23
Mature sequence(if miRNA) 254 - UGAGGCAUGAACUUGGCAAUUUU - 276
Stem-loop(if miRNA) -       U    A   A                C        U       --AAA         -UC     G       AAACUA          UU     G      G         C    G        -AG    UGA
 AAUCACU UUUG GGC UGAACUUGGCAAUUUU CCCACAUU GGGCCUG     UUUUUUUUG   CAAGU AGGCCCU      GGCAAUUGUU  CAUAU GGGGCU GAACUUUUU UUUG UCCAAGUU   UCCU   A
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 UUAGUGA AAAC CCG ACUUGAAUCGUUGAAA GGGUGUAA CCCGGAC     AAAAAAAAC   GUUCA UCCGGGA      CUGUUGACAA  GUGUA CCCCGA CUUGGAAAA AAAC AGGUUCAA   AGGG   A
U       U    C   G                A        C       CUAAA         CAA     A       CUUAAA          GG     A      A         U    -        ACA    UGU
Stem-loop sequence AAUCACUUUUUGAGGCAUGAACUUGGCAAUUUUCCCCACAUUUGGGCCUGAAAUUUUUUUUGUCCAAGUGAGGCCCUAAACUAGGCAAUUGUUUUCAUAUGGGGGCUGGAACUUUUUCUUUGGUCCAAGUUAGUCCUUGAAAUGUGGGAACAAACUUGGACAAAUAAAAGGUUCAAGCCCCAAUGUGGGAACAGUUGUCAAAUUCAGGGCCUAACUUGAACCAAAAAAAAAAAUCCAGGCCCCAAUGUGGGAAAAGUUGCUAAGUUCAGGCCCCAAAUAGUGAUUU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).