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BaseInfo

ncRNA ID gra-miR7504n
Species Gossypium raimondii
Class miRNA
Genome position chr8:21259891-21260015 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - AGGAUAAAAUUACUGAUGUGGCAU - 34
Stem-loop(if miRNA) C                     CAU   C           C  --CA    CAUCCUGAAAA
 AAUAGUUUUAUGCCAUAUUAG   UUU AUCUUGAAUUU AG    UUUU           A
 |||||||||||||||||||||   ||| ||||||||||| ||    ||||           A
 UUAUUAAAAUACGGUGUAGUC   AAA UAGGACUUAAA UC    AAUU           A
A                     AUU   A           U  CUAA    AAACCUAAAUU
Stem-loop sequence CAAUAGUUUUAUGCCAUAUUAGCAUUUUCAUCUUGAAUUUCAGCAUUUUCAUCCUGAAAAAAAUUAAAUCCAAAUUAAAAUCCUUAAAUUCAGGAUAAAAUUACUGAUGUGGCAUAAAAUUAUUA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).