ncRNA ID | gra-miR8673 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr8:20127854-20128017 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - AAGAUAUGUAAACCUUGAGGGCUA - 34 |
Stem-loop(if miRNA) |
A    C            UG U                       -   UAAUUCUAA         - U    A   ACACA  AUAA AAAUUUAGCCUU  A GUUUACAUAUUUUGUUAAUUUGG CCU         AAAUUUAGC C CAAU UUU     U  |||| ||||||||||||  | ||||||||||||||||||||||| |||         ||||||||| | |||| |||  UAUU UUUAAAUCGGGA  U CAAAUGUAUAGAACGAUUGAACC GGA         UUUAAAUCG G GUUA AAA     U -    A            GU C                       A   -CUAAAUUA         A U    C   CACGU |
Stem-loop sequence | AAUAACAAAUUUAGCCUUUGAUGUUUACAUAUUUUGUUAAUUUGGCCUUAAUUCUAAAAAUUUAGCCUCAAUAUUUACACAUUUGCACAAACAUUGUGAGCUAAAUUUAUUAAAUCAGGACCAAGUUAGCAAGAUAUGUAAACCUUGAGGGCUAAAUUUAUUAU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |