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BaseInfo

ncRNA ID gra-miR8673
Species Gossypium raimondii
Class miRNA
Genome position chr8:20127854-20128017 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - AAGAUAUGUAAACCUUGAGGGCUA - 34
Stem-loop(if miRNA) A    C            UG U                       -   UAAUUCUAA         - U    A   ACACA
 AUAA AAAUUUAGCCUU  A GUUUACAUAUUUUGUUAAUUUGG CCU         AAAUUUAGC C CAAU UUU     U
 |||| ||||||||||||  | ||||||||||||||||||||||| |||         ||||||||| | |||| |||
 UAUU UUUAAAUCGGGA  U CAAAUGUAUAGAACGAUUGAACC GGA         UUUAAAUCG G GUUA AAA     U
-    A            GU C                       A   -CUAAAUUA         A U    C   CACGU
Stem-loop sequence AAUAACAAAUUUAGCCUUUGAUGUUUACAUAUUUUGUUAAUUUGGCCUUAAUUCUAAAAAUUUAGCCUCAAUAUUUACACAUUUGCACAAACAUUGUGAGCUAAAUUUAUUAAAUCAGGACCAAGUUAGCAAGAUAUGUAAACCUUGAGGGCUAAAUUUAUUAU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).