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BaseInfo

ncRNA ID gra-miR8784
Species Gossypium raimondii
Class miRNA
Genome position chr8:1308896-1309019 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - UUUGUCGACAUGUCAGGAAAGCGC - 34
Stem-loop(if miRNA) UA  C  C       C         --            A       AGC       AAAAAU
  GA GA CUUUUGU GACAUGUCA  GGAAAGCGCGCC AACUGGA   GUUUUUU      U
  || || ||||||| |||||||||  |||||||||||| |||||||   |||||||
  CU CU GAAAACG CUGUACAGU  CCUUUCGCGCGG UUGAUCU   CAAAAAA      C
AC  A  C       A         UU            G       --A       AAAACU
Stem-loop sequence UAGACGACCUUUUGUCGACAUGUCAGGAAAGCGCGCCAAACUGGAAGCGUUUUUUAAAAAUUCUCAAAAAAAAAACAUCUAGUUGGGCGCGCUUUCCUUUGACAUGUCAGCAAAAGCUCAUCCA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).