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BaseInfo

ncRNA ID gra-miR8696
Species Gossypium raimondii
Class miRNA
Genome position chr7:60022594-60022744 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - AGGCUCUAAUGUGGGAACGACUGC - 34
Stem-loop(if miRNA) G        A    AC              GA      CC     UUU      A    -    -UAAACUU   A
 CCUAAACU GGCA  UGUUCCCACAUUGG  CUUGAA  UUUUU   GUCUAA UUAG UCCU        GAC A
 |||||||| ||||  ||||||||||||||  ||||||  |||||   |||||| |||| ||||        |||
 GGAUUUGA CCGU  GCAAGGGUGUAAUC  GGAUUU  AAAAA   CAGGUU AAUC GGGG        UUG U
-        A    CA              UC      AA     UAU      C    C    UAGUACCU   U
Stem-loop sequence GCCUAAACUAGGCAACUGUUCCCACAUUGGGACUUGAACCUUUUUUUUGUCUAAAUUAGUCCUUAAACUUGACAAUUGUUUCCAUGAUGGGGCCUAACUUGGACUAUAAAAAAAUUUAGGCUCUAAUGUGGGAACGACUGCCAAGUUUAGG

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).