ncRNA ID | gra-miR8696 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr7:60022594-60022744 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - AGGCUCUAAUGUGGGAACGACUGC - 34 |
Stem-loop(if miRNA) |
G        A    AC              GA      CC     UUU      A    -    -UAAACUU   A  CCUAAACU GGCA  UGUUCCCACAUUGG  CUUGAA  UUUUU   GUCUAA UUAG UCCU        GAC A  |||||||| ||||  ||||||||||||||  ||||||  |||||   |||||| |||| ||||        |||  GGAUUUGA CCGU  GCAAGGGUGUAAUC  GGAUUU  AAAAA   CAGGUU AAUC GGGG        UUG U -        A    CA              UC      AA     UAU      C    C    UAGUACCU   U |
Stem-loop sequence | GCCUAAACUAGGCAACUGUUCCCACAUUGGGACUUGAACCUUUUUUUUGUCUAAAUUAGUCCUUAAACUUGACAAUUGUUUCCAUGAUGGGGCCUAACUUGGACUAUAAAAAAAUUUAGGCUCUAAUGUGGGAACGACUGCCAAGUUUAGG |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |