ncRNA ID | gra-miR8741 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr7:56774055-56774254 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - UAGCACUGAAGAUGAUGAUGG - 31 |
Stem-loop(if miRNA) |
-     CAUAC                        C    A     -UAAC    ----------AAC   UUCUCAUUUUCUUGAGGGAGUGGACAUAGCAAAUCU  AUCCC     UAGCACUGAAGAUGAUGAUGGUGA GGGC UGAUC     UUGG             CAG                                    G  |||||     |||||||||||||||||||||||| |||| |||||     ||||             |||                                    A  UAGGG     AUCGUGACUUCUACUACUACCACU CCCG ACUAG     AGCC             ACU                                    U A     -----                        A    A     UACAU    AGCUCCAAACACU   UCACAGUUCGAGUCGGUCAUCUUUUUUGUUUCUCUU |
Stem-loop sequence | AUCCCCAUACUAGCACUGAAGAUGAUGAUGGUGACGGGCAUGAUCUAACUUGGAACCAGUUCUCAUUUUCUUGAGGGAGUGGACAUAGCAAAUCUGAUUUCUCUUUGUUUUUUCUACUGGCUGAGCUUGACACUUCAUCACAAACCUCGACCGAUACAUGAUCAAGCCCAUCACCAUCAUCAUCUUCAGUGCUAGGGAUA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |