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BaseInfo

ncRNA ID ath-miR405b
Species Arabidopsis thaliana
Class miRNA
Genome position chr5:20632514-20632637 [+]
Reference genome TAIR10
Source miRBase
Length 24
Mature sequence(if miRNA) 70 - AUGAGUUGGGUCUAACCCAUAACU - 93
Stem-loop(if miRNA) UUAACCCAUUUAACA     ACCC         -----------                              A
               AUUCA    AUCAAAUGA           AAUGAGUUAUGGGUUAGACCCAACUCAUUU A
               |||||    |||||||||           ||||||||||||||||||||||||||||||
               UGAGU    UAGUUUACU           UUACUCAAUACCCAAUCUGGGUUGAGUAAA C
---------------     --AU         CAAAUAUUAAU                              A
Stem-loop sequence UUAACCCAUUUAACAAUUCAACCCAUCAAAUGAAAUGAGUUAUGGGUUAGACCCAACUCAUUUAACAAAAUGAGUUGGGUCUAACCCAUAACUCAUUUAAUUAUAAACUCAUUUGAUUAUGAGU

Reference

1 PMID:15258262
"Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis";
Sunkar R, Zhu JK;
Plant Cell. 16:2001-2019(2004).