ncRNA ID | ath-miR405b |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr5:20632514-20632637 [+] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 70 - AUGAGUUGGGUCUAACCCAUAACU - 93 |
Stem-loop(if miRNA) |
UUAACCCAUUUAACA     ACCC         -----------                              A                AUUCA    AUCAAAUGA           AAUGAGUUAUGGGUUAGACCCAACUCAUUU A                |||||    |||||||||           ||||||||||||||||||||||||||||||                UGAGU    UAGUUUACU           UUACUCAAUACCCAAUCUGGGUUGAGUAAA C ---------------     --AU         CAAAUAUUAAU                              A |
Stem-loop sequence | UUAACCCAUUUAACAAUUCAACCCAUCAAAUGAAAUGAGUUAUGGGUUAGACCCAACUCAUUUAACAAAAUGAGUUGGGUCUAACCCAUAACUCAUUUAAUUAUAAACUCAUUUGAUUAUGAGU |
1 | PMID:15258262
"Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis"; Sunkar R, Zhu JK; Plant Cell. 16:2001-2019(2004). |