| ncRNA ID | gra-miR7504h |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr7:55185842-55185964 [+] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 90 - AGGAGGAAUAAGUCUGAUUUGUCA - 113 |
| Stem-loop(if miRNA) |
UUUUCUAAUAG - - C CUCC CAAAA GACAAAUCAGAUUU UUCCUCUUGA UUU AGCAUUUUC UGG U |||||||||||||| |||||||||| ||| ||||||||| ||| CUGUUUAGUCUGAA AAGGAGGACU AAA UCGUAAAAG ACC U UUAUUCUCUUA U U A -UCA UAAAU |
| Stem-loop sequence | UUUUCUAAUAGGACAAAUCAGAUUUUUCCUCUUGAUUUCAGCAUUUUCCUCCUGGCAAAAUUUAAAUCCAACUGAAAAUGCUAAAAUUCAGGAGGAAUAAGUCUGAUUUGUCAUUCUCUUAUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012636945.1 |
|
2.5 | PREDICTED: Gossypium raimondii ribosomal protein S2, mitochondrial (LOC105804359), transcript variant X3, mRNA | ribosomal protein S2, mitochondrial(LOC105804359) | coding protein | psRNATarget | |||||||||
| XM_012636944.1 |
|
2.5 | PREDICTED: Gossypium raimondii ribosomal protein S2, mitochondrial (LOC105804359), transcript variant X2, mRNA | ribosomal protein S2, mitochondrial(LOC105804359) | coding protein | psRNATarget | |||||||||
| XM_012636943.1 |
|
2.5 | PREDICTED: Gossypium raimondii ribosomal protein S2, mitochondrial (LOC105804359), transcript variant X1, mRNA | ribosomal protein S2, mitochondrial(LOC105804359) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |