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BaseInfo

ncRNA ID gra-miR8738a
Species Gossypium raimondii
Class miRNA
Genome position chr7:50017669-50017874 [-]
Reference genome Graimondii2_0
Source miRBase
Length 23
Mature sequence(if miRNA) 174 - GUUAACUUUAACGGUCAACGGUU - 196
Stem-loop(if miRNA) CCUGAG                   C  CG       --AG     -   UC  U UAUAAUUUUUUAUGAUUUUUAUAAAAAAAAUUCUAAUUUUUAAUAUUUU
      GGUCGUUAACUUUAACGGU AA  GUUAAAG    UUUUU UAU  AA U                                                 U
      ||||||||||||||||||| ||  |||||||    ||||| |||  || |
      CUAGUAAUUGAAAUUGUCA UU  CAAUUUC    GAUGG AAU  UA A                                                 U
GAAAAA                   A  AA       AAUU     G   --  - AAAAAGUUAGUUUCAGUGGGGCACAGUGUUGGUGCCGCACUAUACACCG
Stem-loop sequence CCUGAGGGUCGUUAACUUUAACGGUCAACGGUUAAAGAGUUUUUUAUUCAAUUUAUAAUUUUUUAUGAUUUUUAUAAAAAAAAUUCUAAUUUUUAAUAUUUUUUGCCACAUAUCACGCCGUGGUUGUGACACGGGGUGACUUUGAUUGAAAAAAAUUAAGGGUAGUUAACUUUAACAAUUAACUGUUAAAGUUAAUGAUCAAAAAG

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).