ncRNA ID | gra-miR8738a |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr7:50017669-50017874 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 23 |
Mature sequence(if miRNA) | 174 - GUUAACUUUAACGGUCAACGGUU - 196 |
Stem-loop(if miRNA) |
CCUGAG                   C  CG       --AG     -   UC  U UAUAAUUUUUUAUGAUUUUUAUAAAAAAAAUUCUAAUUUUUAAUAUUUU       GGUCGUUAACUUUAACGGU AA  GUUAAAG    UUUUU UAU  AA U                                                 U       ||||||||||||||||||| ||  |||||||    ||||| |||  || |       CUAGUAAUUGAAAUUGUCA UU  CAAUUUC    GAUGG AAU  UA A                                                 U GAAAAA                   A  AA       AAUU     G   --  - AAAAAGUUAGUUUCAGUGGGGCACAGUGUUGGUGCCGCACUAUACACCG |
Stem-loop sequence | CCUGAGGGUCGUUAACUUUAACGGUCAACGGUUAAAGAGUUUUUUAUUCAAUUUAUAAUUUUUUAUGAUUUUUAUAAAAAAAAUUCUAAUUUUUAAUAUUUUUUGCCACAUAUCACGCCGUGGUUGUGACACGGGGUGACUUUGAUUGAAAAAAAUUAAGGGUAGUUAACUUUAACAAUUAACUGUUAAAGUUAAUGAUCAAAAAG |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |