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BaseInfo

ncRNA ID	gra-miR8768
Species	Gossypium raimondii
Class	miRNA
Genome position	chr7:29414742-29414861 [+]
Reference genome	Graimondii2_0
Source	miRBase
Length	21
Mature sequence(if miRNA)	11 - UUCCAUGUCACAGAGAUGUUG - 31
Stem-loop(if miRNA)	-      ----                         UGUA  UCAUUUCAAAUCGUUUCUCU  UCCUUU    UCUUUUCCAUGUCACAGAGAUGUUG    GG                    G  ||||||    |||||||||||||||||||||||||    ||                    C  AGGAAG    AGAAAAGGUAUAGUGUUUCUACAAC    CG                    U G      UGGA                         --UA  AAGGACUGAUAAUUAAAGAC
Stem-loop sequence	UCCUUUUCUUUUCCAUGUCACAGAGAUGUUGUGUAGGUCAUUUCAAAUCGUUUCUCUGCUCAGAAAUUAAUAGUCAGGAAGCAUCAACAUCUUUGUGAUAUGGAAAAGAAGGUGAAGGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012587171.1	ncRNA:21   GUUGUAGAGACACUGUACCUU   1   ||=|=|||||||||||||||| targets:542   CAGCGUCUCUGUGACAUGGAA   562 Target Full Sequence	2.0	PREDICTED: Gossypium raimondii basic leucine zipper 34-like (LOC105767597), mRNA	basic leucine zipper 34-like(LOC105767597)	coding protein	psRNATarget

Reference

1	PMID:24044642 "Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013).