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BaseInfo

ncRNA ID gra-miR8762b
Species Gossypium raimondii
Class miRNA
Genome position chr7:26992815-26993080 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - UUAACGUUUGUUAACUUUGUUGAU - 34
Stem-loop(if miRNA) -  -UA               -G                A A                    AAUC    AAUUAAUUUUUUAAAAUUAAAAAAUAUUAAAAUAUUUUUUUAUAAUUUCUAUAAUUAUUUUUAAU
 GA   GAAAAGUUAACGUUU  UUAACUUUGUUGAUGU G AUAUAUGUGGAUUGUCAAGU    AUUU                                                                 U
 ||   |||||||||||||||  |||||||||||||||| | ||||||||||||||||||||    ||||
 CU   UUUUUCAAUUGUAAA  GAUUGAAACAACUACA C UAUGUGUACCUAACGGUUCA    CUAC                                                                 U
A  UAC               AA                A G                    ---C    UGUGUAGUUAUAAAUUAAUUUAAAAAUCUAAAAUUUUUUUAGUUUUUAUAUAUAUUAUAAAAAUU
Stem-loop sequence GAUAGAAAAGUUAACGUUUGUUAACUUUGUUGAUGUAGAAUAUAUGUGGAUUGUCAAGUAAUCAUUUAAUUAAUUUUUUAAAAUUAAAAAAUAUUAAAAUAUUUUUUUAUAAUUUCUAUAAUUAUUUUUAAUUUUUAAAAAUAUUAUAUAUAUUUUUGAUUUUUUUAAAAUCUAAAAAUUUAAUUAAAUAUUGAUGUGUCAUCCACUUGGCAAUCCAUGUGUAUGCAACAUCAACAAAGUUAGAAAAAUGUUAACUUUUUCAUUCA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).