ncRNA ID | gra-miR8639h |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr7:20243037-20243238 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - UAAACAUAAGUAGAAUUAAACAAG - 34 |
Stem-loop(if miRNA) |
G                                                 -------  C   --      -  UU UUUUUGUCUAAAUUUUUUUAUAUUUUUCAA  UAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAAUUCUUUUAAGU       GA AAA  UAUGAA AG  G                              A  |||||||||||||||||||||||||||||||||||||||||||||||||       || |||  |||||| ||  |  AUUACCUUCUGAACAAAUUAAGAUGAAUACAAAUUGUUGAGAAAAUUCG       UA UAU  UUAGUC AA  A                              U -                                                 AAGGUUA  -   GA      U  -- AUCAUUACUUUGACUGAAAAUAUAAAUUAG |
Stem-loop sequence | GUAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAAUUCUUUUAAGUGACAAAUAUGAAAGUUGUUUUUGUCUAAAUUUUUUUAUAUUUUUCAAAUGAUUAAAUAUAAAAGUCAGUUUCAUUACUAAAAUCUGAUUAGUAUAUAUUGGAAGCUUAAAAGAGUUGUUAAACAUAAGUAGAAUUAAACAAGUCUUCCAUUA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |