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BaseInfo

ncRNA ID ath-miR5015
Species Arabidopsis thaliana
Class miRNA
Genome position chr5:20554881-20555053 [-]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 95 - UUGGUGUUAUGUGUAGUCUUC - 115
Stem-loop(if miRNA) UUGUUGUUG UG     A  AUGU                         C  U                 G        C      A
         U  UUGUU UU    UUUGCUUUCGUUAAUGUCAUGUGUU UG UGUUGUUGGUGUUAUGU UAGUCUUC AUGUGA A
         |  ||||| ||    ||||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||
         G  AACAG AG    AAACGAAAGCAAUUACGGUACACAA AC ACAACAACUACAAUACA AUCAGAAG UACACU U
-GAUUUUAA GU     A  --GU                         A  C                 A        A      A
Stem-loop sequence UUGUUGUUGUUGUUGUUAUUAUGUUUUGCUUUCGUUAAUGUCAUGUGUUCUGUUGUUGUUGGUGUUAUGUGUAGUCUUCCAUGUGAAAUAUCACAUAGAAGACUAAACAUAACAUCAACAACACCAAAACACAUGGCAUUAACGAAAGCAAAUGGAAGACAAUGGAAUUUUAG

Reference

1 PMID:21357774
"MicroRNA activity in the Arabidopsis male germline";
Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD;
J Exp Bot. 62:1611-1620(2011).