ncRNA ID | ath-miR5015 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr5:20554881-20555053 [-] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 95 - UUGGUGUUAUGUGUAGUCUUC - 115 |
Stem-loop(if miRNA) |
UUGUUGUUG UG     A  AUGU                         C  U                 G        C      A          U  UUGUU UU    UUUGCUUUCGUUAAUGUCAUGUGUU UG UGUUGUUGGUGUUAUGU UAGUCUUC AUGUGA A          |  ||||| ||    ||||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||          G  AACAG AG    AAACGAAAGCAAUUACGGUACACAA AC ACAACAACUACAAUACA AUCAGAAG UACACU U -GAUUUUAA GU     A  --GU                         A  C                 A        A      A |
Stem-loop sequence | UUGUUGUUGUUGUUGUUAUUAUGUUUUGCUUUCGUUAAUGUCAUGUGUUCUGUUGUUGUUGGUGUUAUGUGUAGUCUUCCAUGUGAAAUAUCACAUAGAAGACUAAACAUAACAUCAACAACACCAAAACACAUGGCAUUAACGAAAGCAAAUGGAAGACAAUGGAAUUUUAG |
1 | PMID:21357774
"MicroRNA activity in the Arabidopsis male germline"; Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD; J Exp Bot. 62:1611-1620(2011). |