ncRNA ID | gra-miR8639i |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr7:20243036-20243237 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 169 - UAAACAUAAGUAGAAUUAAACAAG - 192 |
Stem-loop(if miRNA) |
G                                      C         CUUCCAAUAUAUACUAA    A  UUAGUAAUGAAACUGACUUUUAUAUUUAAUCAUUUG  UAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAA UCUUUUAAG                 UCAG UU                                    A  |||||||||||||||||||||||||||||||||||||| |||||||||                 |||| ||  AUUACCUUCUGAACAAAUUAAGAUGAAUACAAAUUGUU AGAAAAUUC                 CUGU UU                                    A -                                      A         ----------------A    -  AUACUUUCAACAAAAACAGAUUUAAAAAAAUAUAAA |
Stem-loop sequence | GUAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAACUCUUUUAAGCUUCCAAUAUAUACUAAUCAGAUUUUAGUAAUGAAACUGACUUUUAUAUUUAAUCAUUUGAAAAAUAUAAAAAAAUUUAGACAAAAACAACUUUCAUAUUUGUCACUUAAAAGAAUUGUUAAACAUAAGUAGAAUUAAACAAGUCUUCCAUUA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |