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BaseInfo

ncRNA ID gra-miR8639i
Species Gossypium raimondii
Class miRNA
Genome position chr7:20243036-20243237 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 169 - UAAACAUAAGUAGAAUUAAACAAG - 192
Stem-loop(if miRNA) G                                      C         CUUCCAAUAUAUACUAA    A  UUAGUAAUGAAACUGACUUUUAUAUUUAAUCAUUUG
 UAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAA UCUUUUAAG                 UCAG UU                                    A
 |||||||||||||||||||||||||||||||||||||| |||||||||                 |||| ||
 AUUACCUUCUGAACAAAUUAAGAUGAAUACAAAUUGUU AGAAAAUUC                 CUGU UU                                    A
-                                      A         ----------------A    -  AUACUUUCAACAAAAACAGAUUUAAAAAAAUAUAAA
Stem-loop sequence GUAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAACUCUUUUAAGCUUCCAAUAUAUACUAAUCAGAUUUUAGUAAUGAAACUGACUUUUAUAUUUAAUCAUUUGAAAAAUAUAAAAAAAUUUAGACAAAAACAACUUUCAUAUUUGUCACUUAAAAGAAUUGUUAAACAUAAGUAGAAUUAAACAAGUCUUCCAUUA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).