ncRNA ID | gra-miR8752 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr7:465419-465657 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 209 - UGAUGGAGAUAGGUAUCUGCA - 229 |
Stem-loop(if miRNA) |
AC A A G - A AUA ACA AU AAUUACA -------CACC --A -U U AAG GCU GUCUU AUUG UG AGAUAGGUAUCUGCAGGAUUUG AGAA G UCUAUAUAGG UGUGA AUAAUAA GGAG CCG GAUUC ACC ACCAACC GC U ||||| |||| || |||||||||||||||||||||| |||| | |||||||||| ||||| ||||||| |||| ||| ||||| ||| ||||||| || CAGAA UGAC AC UCUAUUCAUAGACGUUUUGAGC UCUU C AGAUAUAUUC GCAUU UAUUAUU CCUC GGC CUGAG UGG UGGUUGG CG U UA C C A C C -AC --C CU ------A AAUAGACUUAC CUG UU - CUA AAU |
Stem-loop sequence | ACGUCUUAAUUGAUGGAGAUAGGUAUCUGCAGGAUUUGAGAAAGAUAUCUAUAUAGGACAUGUGAAUAUAAUAAAAUUACAGGAGCACCCCGAGAUUCUACCUACCAACCAAGGCGCUUUUAAGCAUCGGUUGGUGGUUUGAGUCGUCCGGCAUUCAGAUAACUCCAUUAUUAUUCUUACGCCUUAUAUAGACACCUUCUCCGAGUUUUGCAGAUACUUAUCUACACCAGUCAAGACAU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |